PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62017032-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GATA
Protein Properties Length: 249aa    MW: 27199.7 Da    PI: 7.8334
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62017032-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA44.81.7e-1469103135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++ g+ +Tp+WR gp g+ tLCnaCGl y ++g+
  AUR62017032-RA  69 CTHSGAQETPQWRLGPKGPLTLCNACGLSYLRMGH 103
                     9999*************************988776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MLGYANHYHL LSHTPPSFVS TDPTYTCDDS NCGGDDDDDV IIDPLTPSPE TGPSKKKSKK  60
SGPLTRKRCT HSGAQETPQW RLGPKGPLTL CNACGLSYLR MGHLLPEYRP VRSPTFSTQI  120
HSNFYRNREV KEMRKKMSEI MGRPDSETLP HPISSFDDLA VANSGSSSCI LDHPVSSSEK  180
YEISPLTASE RTVMQLPSSG GSSNDAEAMV TLLERHKYNL DGIKAGLKHG VLKVIVPKVR  240
DVSCIQTS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.11e-23GATA family protein