PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62017038-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Dof

Protein Properties

Length: 277aa MW: 30075.4 Da PI: 8.1518

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62017038-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	113.5	9.4e-36	43	100	4	61
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +l+cprC+stntkfCy+nnyslsqPryfCk+C+ryWt+GG+lrnvPvGg +r +k+s AUR62017038-RA 43 PTLTCPRCHSTNTKFCYFNNYSLSQPRYFCKGCKRYWTQGGTLRNVPVGGKSRMSKRS 100 5789**************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MEYQTVVVGG CSGAGAGGDG KDDRNKRPVP VEGGRQNNSN HPPTLTCPRC HSTNTKFCYF 60 NNYSLSQPRY FCKGCKRYWT QGGTLRNVPV GGKSRMSKRS KLESVAVSAT NTASTSHRQP 120 ASLPQQPLLL PPQSIAVPPT VVFPNNGNMR HFRHQNDVNS SMLEIRVPHA TSNSLTPSSI 180 SSSTNMRNDD LLRGLNVMPS QSNHVMNFYP ATAGPVLGDS LNVGSDVLAL LPPPPQPEVD 240 DNNKNHHDIH NVEDNDGERN ILEWANYIST GGFDEA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61850.2	4e-30	Dof family protein