PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62017052-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 142aa    MW: 15524.6 Da    PI: 9.9281
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62017052-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.62e-203080155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++++GVr ++ +gr++AeIrdp++   + r++lg+f+taeeAa+a++ a+++++g
  AUR62017052-RA 30 THFRGVRKRP-WGRYAAEIRDPTK---KSRVWLGTFDTAEEAARAYDDAARAFRG 80
                    589*******.**********864...6************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MAPKIVGGGA GGIGVKVNSV NGGGVNAKET HFRGVRKRPW GRYAAEIRDP TKKSRVWLGT  60
FDTAEEAARA YDDAARAFRG RIRAEDCCGP RINALHMEID DPFSAVTLKY RFGGVFKTYA  120
NGEVYSDLEV LEMRSVVEKN R*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.11e-19ERF family protein