PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62017058-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 539aa    MW: 60309.9 Da    PI: 6.0928
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62017058-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS404.51e-123954531361
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l+e+L++cA+a+s++dl  a +l+++l++++s +g+p+qRl ay++e+L ar ++s+ ++y+al+++e +   sse l+++++++ev+P++kf++
  AUR62017058-RA  95 LREVLIACAKAISNDDLLTAGWLISELQHMVSVSGEPIQRLGAYILEGLIARYSSSGISIYRALNCKEPT---SSEFLSYMQVLYEVCPYFKFGY 186
                     6899*****************************************************************9...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN aI ea+++e+r+HiiDf+i qG QW++L+qaLa+Rp+gpp++RiTg+++++s+  +   l+ +gerL+ +A+++++pfef++ + +  ++
  AUR62017058-RA 187 MSANGAIAEALKNEDRIHIIDFQIAQGSQWVSLIQALAARPGGPPRVRITGIDDSTSEfaRGGGLNIVGERLSMLAKACNLPFEFHAAALSCGAE 281
                     ******************************************************99889999*************************888999** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++++L +k++EalaVn+ + lh+++desv  +++rd++L+lvks sPkvv++ve e+++ns++F  rfle+leyysa+f+s++++l+++ +eri
  AUR62017058-RA 282 VKVQNLVLKSEEALAVNFPFLLHHIPDESVGPQNHRDTLLRLVKSWSPKVVTLVEYELNTNSAPFYPRFLETLEYYSAIFESINVTLSKDRKERI 376
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlg 361
                     +vE+++l++eivn++acegaer+erhe  +kWr+r+++aGFkp+pl+  +++++k ll+k++ + y +ee++g+l+lg
  AUR62017058-RA 377 NVEQHCLAKEIVNIIACEGAERVERHELHGKWRSRFTMAGFKPYPLNPLVNATIKNLLQKYS-RCYGLEERDGTLYLG 453
                     **************************************************************.77**********996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 539 aa     Download sequence    
MQNLRNLQGI YCTFESSLLS GVDNPCGSPS TGSISGNGST VSLFDPESPS IDSLEIGNLW  60
HHLKELESVM MEPTSDNFYN ENWQQLREMI SRRELREVLI ACAKAISNDD LLTAGWLISE  120
LQHMVSVSGE PIQRLGAYIL EGLIARYSSS GISIYRALNC KEPTSSEFLS YMQVLYEVCP  180
YFKFGYMSAN GAIAEALKNE DRIHIIDFQI AQGSQWVSLI QALAARPGGP PRVRITGIDD  240
STSEFARGGG LNIVGERLSM LAKACNLPFE FHAAALSCGA EVKVQNLVLK SEEALAVNFP  300
FLLHHIPDES VGPQNHRDTL LRLVKSWSPK VVTLVEYELN TNSAPFYPRF LETLEYYSAI  360
FESINVTLSK DRKERINVEQ HCLAKEIVNI IACEGAERVE RHELHGKWRS RFTMAGFKPY  420
PLNPLVNATI KNLLQKYSRC YGLEERDGTL YLGGVIGGAP KYYFRHKRTS TSWGLQVFNI  480
THLEFETDGL DLKLILERVH AHLDHLLAAV LTDVNTFLSS ECSVNIILAV KLTQWQII*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein