PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62017406-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 410aa    MW: 45228.4 Da    PI: 6.5076
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62017406-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR128.45.4e-0988186185
            FAR1   1 kfYneYAkevGFsvrkskskks.....krngeitkrtfvCskegkreeekkk.........tekerrtraetrtgCkaklkvkkekdgkwevtkl 81 
                     kfY++Y+k+ GF v +++ + +     +++ +  ++ + C + gk++ +++           +   ++r+++++gC  +++   + dg wev k 
  AUR62017406-RA  88 KFYRKYGKQRGFGVYRAAGNFKiengkTDKSKRRSYIWHCECAGKADLRRRVnekrvygggLSLDLNRRKTKKCGCPVEMRAVCKPDGCWEVRKA 182
                     6**************999888766653233334455678*******99988844555555544444599*************************9 PP

            FAR1  82 eleH 85 
                      + H
  AUR62017406-RA 183 ITAH 186
                     9999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    
MELNEEEVGD HEIEVLDLDL EVAEEVGVMD TPVVDVLGSG GVFEDGNDGN AATTPLRCVV  60
ESDEGAYKDL LDHPQVGMVF SSWEDADKFY RKYGKQRGFG VYRAAGNFKI ENGKTDKSKR  120
RSYIWHCECA GKADLRRRVN EKRVYGGGLS LDLNRRKTKK CGCPVEMRAV CKPDGCWEVR  180
KAITAHGSGT DTIQKDVECD NTGMESSPSV NKDFVYKDSD SVMLHNDLGD SVVNERSALG  240
LNEISIDPLH NTPTPMELVP NEGGFNCGSS VNENISAGDG SVQKPLSVGD SISRKKPHRP  300
RAKRFLSFVE KCAKKASSAR TKTTTKTNNV WELWSAGRSE QGYQKKRKAK ESERVASSCN  360
CYGCGWNSPY DVGWRDWVWS SLCASMSAAS YVQHYNGSAT SYVQQQYNG*