PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62017521-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 247aa    MW: 29011.7 Da    PI: 5.4212
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62017521-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.61.1e-132791898
                    --HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE- CS
              B3 18 lpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfr 98
                    +p ++++++g+  +    ++l+  ++gr+W+v++   k s++++ltkGW++ v    +k gDf++Fk+d+r s f   + +f+
  AUR62017521-RA  2 IPEEYVNKNGQRFAY-DYVRLRVgKDGRVWRVEV--YKESDQIWLTKGWERVVMNYSIKGGDFLLFKYDERdSMF--QLNIFD 79
                    777777777544333.2577776699********..*********************************876777..777776 PP
2B350.53.7e-16145243199
                     EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                     f+ ++ ps+v++  r ++p +++++h  + + ++++l+ +d++  s+ v+l+  +k ++   + GWk+Fv +n+L++gD +vF+l+  ++  ++v
  AUR62017521-RA 145 FKVIMQPSYVSNVFRYSFPIRHVRKHlRLLEVQQIQLKATDRE-GSYPVRLNLHNKNSQAAVGFGWKKFVLENDLQVGDGCVFELICPQTNAYKV 238
                     6778899999999**************7777788788877755.58999998866666667899**********************9988889** PP

                     EEE-S CS
              B3  95 kvfrk 99 
                     ++fr 
  AUR62017521-RA 239 TIFRV 243
                     *9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
RIPEEYVNKN GQRFAYDYVR LRVGKDGRVW RVEVYKESDQ IWLTKGWERV VMNYSIKGGD  60
FLLFKYDERD SMFQLNIFDT TGFEIEYDQQ VEQISSASEE MVLIDDNDHD HISLSEDDDV  120
AVYEPMDPTD VESRVEAYKT KNPHFKVIMQ PSYVSNVFRY SFPIRHVRKH LRLLEVQQIQ  180
LKATDREGSY PVRLNLHNKN SQAAVGFGWK KFVLENDLQV GDGCVFELIC PQTNAYKVTI  240
FRVPRF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.14e-11B3 family protein