PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62017522-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 161aa    MW: 18800.3 Da    PI: 6.6765
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62017522-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.12.5e-1658155198
                     EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                     f+ ++ ps+v++  r ++p +++++h +  + ++  ++l+   + +s+ v+l+  ++ ++++ + GWk+Fv   +L++gD +vF+l+  ++  ++
  AUR62017522-RA  58 FKVIMQPSYVSNGFRYSFPIRHVRRHlKPLEVQQ--IQLKAtDHEKSYPVRLNLYNHNSQVFAGFGWKKFVLNYNLQAGDGCVFELVCPQSNAYK 150
                     6778999*******************63333454..566553488*******999999999**************************9988889* PP

                     EEEE- CS
              B3  94 vkvfr 98 
                     v++fr
  AUR62017522-RA 151 VTIFR 155
                     **998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MELQKENNNV MFLGKGWEVF MEFYNLEYED DDVAIDESME QTDVESRLEA YKTKNPHFKV  60
IMQPSYVSNG FRYSFPIRHV RRHLKPLEVQ QIQLKATDHE KSYPVRLNLY NHNSQVFAGF  120
GWKKFVLNYN LQAGDGCVFE LVCPQSNAYK VTIFRVAATT *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-12B3 family protein