PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62017848-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 703aa MW: 80586.9 Da PI: 6.9116

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62017848-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	82.3	8.3e-26	89	190	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk............tekerrtraetrtgCkaklkvkkekdgkwevtklele 84 fY+eYA+++GF++ +++s++sk+++e+++++f Cs++g+++e +k e++ +r+ +t+Cka+++vk++ dg+w+++++ +e AUR62017848-RA 89 FYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKGnrprirqcnkqePESATGRRSCGKTNCKASMHVKRRPDGRWVIHSFIKE 183 9************************************999998889999999775555555589999********************** PP FAR1 85 HnHelap 91 HnH+l p AUR62017848-RA 184 HNHDLLP 190 **975 PP

Sequence ? help Back to Top
Protein Sequence Length: 703 aa Download sequence
MDIDLRLPSG EEEDRQDEDQ TTDSNMLDRE DRLDNSGDAE TVLVVPEVHA EEELALNSIT 60 PDLVEYKEDV NLEPLHGMEF VSHQEAYAFY QEYARSMGFN TAIQNSRRSK TSREFIDAKF 120 ACSRYGTKRE YDKGNRPRIR QCNKQEPESA TGRRSCGKTN CKASMHVKRR PDGRWVIHSF 180 IKEHNHDLLP AQATWLKAMG GQAPKVIITD QDDAIKSAVS ENVPNTRHCF HLWHILGKVS 240 ENLGHIIKKH ENFMAKFDKC IYRSWSDEEF EKRWEKLVVR FELKDDEWIR SLYDDRKLWV 300 PTYMKGSFLA GMSVVQRSES VNSYFDKYVH KKTTVSEFIK QYDTIIQDRY EEEARADSDT 360 LNKQPALKSP SPFEKHMSTL YTHAMFKKFQ VEVLGAVACH PKRERQDELI ITFKVQDFEK 420 NQDFVVTWNE MKSEVSCICH LFEYKGFLCR HAMIVLQICG LSMIPPQYIL KRWTKDAKER 480 HLIGEVMEQV PSRVQRYNHL CNRAMKLSEE GSLSQESYNL ALRALDEAFT NCIGVNDACK 540 THMEVGTSAT HGLLSIEDGS PSRSFSKTTK KKNPTKKRKM NTEAEAMAIG SQDGLQQMDK 600 LGSRPVTTLD GFYGTQPSVQ GMVQLNLMAP TRENYYGNPA AIQGLGQLNS IAPSHEGYYG 660 QQSMHGLGQM DFFRTPTGFP YGIREEANVR PAQLHDDGAR HS*

Sequence ? help Back to Top

Protein Sequence Length: 703 aa Download sequence

MDIDLRLPSG EEEDRQDEDQ TTDSNMLDRE DRLDNSGDAE TVLVVPEVHA EEELALNSIT  60
PDLVEYKEDV NLEPLHGMEF VSHQEAYAFY QEYARSMGFN TAIQNSRRSK TSREFIDAKF  120
ACSRYGTKRE YDKGNRPRIR QCNKQEPESA TGRRSCGKTN CKASMHVKRR PDGRWVIHSF  180
IKEHNHDLLP AQATWLKAMG GQAPKVIITD QDDAIKSAVS ENVPNTRHCF HLWHILGKVS  240
ENLGHIIKKH ENFMAKFDKC IYRSWSDEEF EKRWEKLVVR FELKDDEWIR SLYDDRKLWV  300
PTYMKGSFLA GMSVVQRSES VNSYFDKYVH KKTTVSEFIK QYDTIIQDRY EEEARADSDT  360
LNKQPALKSP SPFEKHMSTL YTHAMFKKFQ VEVLGAVACH PKRERQDELI ITFKVQDFEK  420
NQDFVVTWNE MKSEVSCICH LFEYKGFLCR HAMIVLQICG LSMIPPQYIL KRWTKDAKER  480
HLIGEVMEQV PSRVQRYNHL CNRAMKLSEE GSLSQESYNL ALRALDEAFT NCIGVNDACK  540
THMEVGTSAT HGLLSIEDGS PSRSFSKTTK KKNPTKKRKM NTEAEAMAIG SQDGLQQMDK  600
LGSRPVTTLD GFYGTQPSVQ GMVQLNLMAP TRENYYGNPA AIQGLGQLNS IAPSHEGYYG  660
QQSMHGLGQM DFFRTPTGFP YGIREEANVR PAQLHDDGAR HS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	0.0	FAR1 family protein