PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62017896-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 225aa    MW: 26482.6 Da    PI: 4.8812
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62017896-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM836e-26141491128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.........lelee...vikev.d.iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 
                     lppGfrF+Ptdeelv +++  k++ ++         +   +    i+e+ d  ++++P++L+ ++ ++  +wyf++++         +nr+ ++g
  AUR62017896-RA  14 LPPGFRFDPTDEELVLHFMYSKLKLSSssrnypsnnC---NnphLIPELeDfFHHYHPRQLHGEAFESCGQWYFYTRKT--------ENRVSENG 97 
                     79********************998886666665443...0443699997645667*****9555455679****9874........58999*** PP

             NAM  82 yWk.atgkdkevlsk..kgelvglkktLvfy.kg.rapkgektdWvmheyrl 128
                     yW+   g d+++++    ++lvglkk Lvfy kg  a++g+k  W+m+ey++
  AUR62017896-RA  98 YWEeLVGMDQPIYAGnnCNKLVGLKKWLVFYdKGmYASSGVKNGWFMQEYHA 149
                     **945799*****97666778**********5446899************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MIENNENMLD MKQLPPGFRF DPTDEELVLH FMYSKLKLSS SSRNYPSNNC NNPHLIPELE  60
DFFHHYHPRQ LHGEAFESCG QWYFYTRKTE NRVSENGYWE ELVGMDQPIY AGNNCNKLVG  120
LKKWLVFYDK GMYASSGVKN GWFMQEYHAC SNNNLFKRRK SKQPAADVMN KWVLCRVQQV  180
CDESQWMNTL NEDKYNNEVE LSSSDEAVFL AMEENDQDEV TYPY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.11e-35NAC family protein