PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62018002-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Dof

Protein Properties

Length: 333aa MW: 36186.9 Da PI: 8.0036

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62018002-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.5	3.4e-39	37	95	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 alkcprCds+ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvP+Ggg+rk kk+ AUR62018002-RA 37 PPALKCPRCDSSNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKTKKH 95 5679***************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MMSSENIPPV AHPSDHNNNG GTANARKQTS QKPPEQPPAL KCPRCDSSNT KFCYYNNYSL 60 TQPRHFCKTC RRYWTKGGAL RNVPIGGGCR KTKKHKPSNS CPPSSISNSS RFDLSAGPGS 120 SEFKFLAPPT VAPAMEFQLG GLSFPRLHPA TAGVYTQFIA SSGAHHPPVG PGTGGCFSLD 180 LLGIGGDQTI SISSIESLSS INQEMHWKLQ QQRLAMIYGQ PTVDNQIDEN NNNHQDKGLS 240 VGGGISLFKN LENISRNSNK IDVGGPTEWL FDQLQTNSTA NYADNHNTNN NNNSNVGVTT 300 TNCNNNEDDF NGVWTTAELH NHQQHHQFNG LH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65590.1	1e-47	Dof family protein