PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62018057-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 210aa    MW: 23449.3 Da    PI: 4.8335
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62018057-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.36.1e-213786255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+G+r+++ +g+W+AeIrdp++     r++lg+f ++eeAa+a++aa+kk++g
  AUR62018057-RA 37 VYRGIRRRP-WGKWAAEIRDPRK---GVRVWLGTFNSPEEAARAYDAAAKKIRG 86
                    69*******.**********954...4*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MNLLGSPFDG VKTHQEDVNR AERVANPSQT PRTRKNVYRG IRRRPWGKWA AEIRDPRKGV  60
RVWLGTFNSP EEAARAYDAA AKKIRGDKAK LNFPDTPPLP PSPLLTAPLE EIFLPVAKRQ  120
RISDFTESST LSNESTQMPM MSMGFYGDGV DHLTSEEDFV NGMNNNDLSQ QILDLESLLG  180
LDHGVELAES DSTSLPWVMD EFPMINGYD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.16e-34ERF family protein