PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62018103-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 114aa    MW: 12613.4 Da    PI: 10.0822
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62018103-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.51.3e-171466148
                     TSSS-HHHHHHHHHHHHHTTTT......-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg......tWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l+ +++++G g      t ++Ia +++ +Rt++++k++w+++l
   AUR62018103-RA 14 KGPWTPEEDQKLLAYIEEHGHGnwralpTKAAIATHLP-KRTDNEIKNYWNTHL 66
                     79********************6666666678999999.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    
MGRSPCCDKL GLKKGPWTPE EDQKLLAYIE EHGHGNWRAL PTKAAIATHL PKRTDNEIKN  60
YWNTHLKKRL AKMGIDPVTH KPKNDALLPA ANGGSGQQSK NAANLSHIAQ WESA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15310.16e-56MYB family protein