PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62018364-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 198aa    MW: 22084.8 Da    PI: 7.3906
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62018364-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.54.8e-134895254
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    r  h+e+E+rRR+riNs +++Lr++lP        K +Ka+ L k+v+ + +L
  AUR62018364-RA 48 RIHHKEAEKRRRERINSHLDRLRSILPCT-----SKTDKATLLSKVVQRVLEL 95
                    889*************************7.....699******9999877766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MQQFSDEFPN NTTSSEMEIY RSSGSCSASF YTGLLNETTE AKALAASRIH HKEAEKRRRE  60
RINSHLDRLR SILPCTSKTD KATLLSKVVQ RVLELKRQTS ELNELDNLMI PSENDEPDLF  120
ADLNGVLSSL NLKTLRAEVS SLGGRIQSVF IVSADSSVQS DECAVFLRDA LKGVVQRSGS  180
DERLKRRRRV FDTAAEC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1185190KRRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41130.16e-34bHLH family protein