PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62018478-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 1179aa MW: 133031 Da PI: 6.4538

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62018478-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	30.2	9.3e-10	51	71	2	22
--SS-EEEEEEE--TT-SS-E CS WRKY 2 dDgynWrKYGqKevkgsefpr 22 dDgy+WrKYGqKe+ gs++pr AUR62018478-RA 51 DDGYSWRKYGQKEILGSKYPR 71 8*******************9 PP
2	WRKY	33.3	9.6e-11	89	130	19	59
SS-EEEEEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 19 efprsYYrCtsa..gCpvkkkversaedpkvveitYegeHnhe 59 + rsY+rCt++ gC + kkv+r + ++++ +i Y+g H+++ AUR62018478-RA 89 KGGRSYFRCTYKeeGCAAVKKVQRID-EGDAYQISYKGLHTCS 130 567******9999******9.************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1179 aa Download sequence
MELMKISSKE KDLSGIRKSY EQVWKQDSHF PVKRKRSNIQ STEIVVQELT DDGYSWRKYG 60 QKEILGSKYP RYNGVEDILR ACLIWVHKKG GRSYFRCTYK EEGCAAVKKV QRIDEGDAYQ 120 ISYKGLHTCS NGARIIPGST SGASDSQSFK ISFGVDECRA LEAPTELTGT ESFTITGIPF 180 FGSKGTNTPD SERETYAKCS QNQNADVTSQ IRLDESIIST IHNADVTSQI RLDESIIPTI 240 HNVDSTFSAN DKITKEGEIE TSLTHCRLRN VVNLGFSSWP TAKYSKSTDC SLQRLLSAFQ 300 DVEVKKIGIY GAGGIGKTTL MKAFLSRDDV KRSFDLVLWV TIPRCSSRRK IQNSLIQQLS 360 LNVPNIKSDD EVAMILLQTL LARKFILFLD DVWEYIDLPM VGIPIGNLDN DYMIILTTIS 420 IHICEAMEVD RTIEAQVLSR KESLQLFRFH VGNVMVSEDI EPYGRAIVDE CSGLPLAIKV 480 AGSALRMDSS IFAWKSTVKN ILLTNCLQVL KIGYDRLKEH DIRSSFLYHA LFTERKAVSI 540 SSLVGYLVDE GIVSGSMSDA HRRGHDIIKY LIDVSLLQCT DDGLMVEMHG FLRDLALVIL 600 SDAKGLQMLL IRYFRSILSQ KTLLSHISNP TFEQPEGHLS ILKAGDDLSE PPSEEEWEEA 660 KMVFLMDNTL SSLPKRPACS KLLALFLQRN SCLRVIPSSL FENMSSLQIL NLSKTRIKSL 720 PQSLTKLECL QVLILRNCQR LFYLPPTIGA LKHLLVLDVH GTEICQLPDQ ICELLCLVHL 780 QVCFYGSMDE DECAMLPPQL ISKGIMSNLV QLKELSINVY PGDPRWTKVA SDVTTEVSNL 840 KLCSLSFHFP DIKNLEYFID VSPAWLHRTL THFKFVVGHD VKRVVSHVSD YLEHEYYQQD 900 RCLRFVNGEG MPDAVGKVLS QATAFYVDHH LTAQSLTQFG RATINDLKIC VVRDCPKLKA 960 IINSTKRTGN FFPFLELLSI HYSWNLCWIW AGPIRAGSLS RLRRLSVHSC PKLELILCRS 1020 MVAVLSNLEE LTVEDCQSLK NVISSQDQSS ADHDIGDNDF CEPNVTDVNS IEDVGNDQME 1080 VDPPDAAELR LKVLKLHYLP KLVNIWNSGD IPCLEYISIY NCPRMKNLDL KSPVEATIKE 1140 IKAETCWWDG LEWRDPALPA KLQGRFKEIQ SDDIWNSM*

Sequence ? help Back to Top

Protein Sequence Length: 1179 aa Download sequence

MELMKISSKE KDLSGIRKSY EQVWKQDSHF PVKRKRSNIQ STEIVVQELT DDGYSWRKYG  60
QKEILGSKYP RYNGVEDILR ACLIWVHKKG GRSYFRCTYK EEGCAAVKKV QRIDEGDAYQ  120
ISYKGLHTCS NGARIIPGST SGASDSQSFK ISFGVDECRA LEAPTELTGT ESFTITGIPF  180
FGSKGTNTPD SERETYAKCS QNQNADVTSQ IRLDESIIST IHNADVTSQI RLDESIIPTI  240
HNVDSTFSAN DKITKEGEIE TSLTHCRLRN VVNLGFSSWP TAKYSKSTDC SLQRLLSAFQ  300
DVEVKKIGIY GAGGIGKTTL MKAFLSRDDV KRSFDLVLWV TIPRCSSRRK IQNSLIQQLS  360
LNVPNIKSDD EVAMILLQTL LARKFILFLD DVWEYIDLPM VGIPIGNLDN DYMIILTTIS  420
IHICEAMEVD RTIEAQVLSR KESLQLFRFH VGNVMVSEDI EPYGRAIVDE CSGLPLAIKV  480
AGSALRMDSS IFAWKSTVKN ILLTNCLQVL KIGYDRLKEH DIRSSFLYHA LFTERKAVSI  540
SSLVGYLVDE GIVSGSMSDA HRRGHDIIKY LIDVSLLQCT DDGLMVEMHG FLRDLALVIL  600
SDAKGLQMLL IRYFRSILSQ KTLLSHISNP TFEQPEGHLS ILKAGDDLSE PPSEEEWEEA  660
KMVFLMDNTL SSLPKRPACS KLLALFLQRN SCLRVIPSSL FENMSSLQIL NLSKTRIKSL  720
PQSLTKLECL QVLILRNCQR LFYLPPTIGA LKHLLVLDVH GTEICQLPDQ ICELLCLVHL  780
QVCFYGSMDE DECAMLPPQL ISKGIMSNLV QLKELSINVY PGDPRWTKVA SDVTTEVSNL  840
KLCSLSFHFP DIKNLEYFID VSPAWLHRTL THFKFVVGHD VKRVVSHVSD YLEHEYYQQD  900
RCLRFVNGEG MPDAVGKVLS QATAFYVDHH LTAQSLTQFG RATINDLKIC VVRDCPKLKA  960
IINSTKRTGN FFPFLELLSI HYSWNLCWIW AGPIRAGSLS RLRRLSVHSC PKLELILCRS  1020
MVAVLSNLEE LTVEDCQSLK NVISSQDQSS ADHDIGDNDF CEPNVTDVNS IEDVGNDQME  1080
VDPPDAAELR LKVLKLHYLP KLVNIWNSGD IPCLEYISIY NCPRMKNLDL KSPVEATIKE  1140
IKAETCWWDG LEWRDPALPA KLQGRFKEIQ SDDIWNSM*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24110.1	2e-17	WRKY family protein