PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62018611-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family BBR-BPC
Protein Properties Length: 230aa    MW: 25075.3 Da    PI: 10.4729
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62018611-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind246.91.4e-7548229122301
       GAGA_bind 122 savelreeeklealpieeaaeeakekk..kkkkrqrakkpkekkak.kkkkksekskkkvkkesaderskaekksidlvlngvslDestlPvPvC 213
                     +++++     +  +pi+eaa+ + + +   +k  +++k+ k++  + ++k++++k kk+++k++ ++ +k+e+ks++   n+ s D s++P+PvC
  AUR62018611-RA  48 NPEGALSAMPIRCMPINEAANIVVDDEpqPSKPAKKPKTSKKTSDDaAPKERKPKIKKSKAKSG-SSAAKRERKSLNSRSNESSTDASGIPAPVC 141
                     4444444555566666666665433320022333333333333333355555555555555555.4789************************** PP

       GAGA_bind 214 sCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     sCtGa rqCY+WG+GGWqS+CCtt+iS yPLP+s++r+g+R agrKmS+ga+ kl ++LaaeGyd+  p+DLkdhWAkHGtnkfvti+
  AUR62018611-RA 142 SCTGAARQCYRWGSGGWQSSCCTTNISEYPLPMSATRPGSRTAGRKMSHGAYDKLFQRLAAEGYDFTLPIDLKDHWAKHGTNKFVTIK 229
                     ***************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MGTFRSNYPI IPEGNRSRSV PHFSWFHPGN YLAATRNGFN PFQGTQHNPE GALSAMPIRC  60
MPINEAANIV VDDEPQPSKP AKKPKTSKKT SDDAAPKERK PKIKKSKAKS GSSAAKRERK  120
SLNSRSNESS TDASGIPAPV CSCTGAARQC YRWGSGGWQS SCCTTNISEY PLPMSATRPG  180
SRTAGRKMSH GAYDKLFQRL AAEGYDFTLP IDLKDHWAKH GTNKFVTIK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35550.36e-54BBR-BPC family protein