PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62018723-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C2H2
Protein Properties Length: 191aa    MW: 21605.2 Da    PI: 8.3529
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62018723-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2157.1e-054769123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C++ F++   L  H+++H
  AUR62018723-RA 47 YTCTFCKREFRSAQALGGHMNVH 69
                    9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MWRSSTNMKG VSIIVKEGEG EDTWELARAF AEDTRSTMDT NWPPRSYTCT FCKREFRSAQ  60
ALGGHMNVHR RDRARLHHQS TVQAQAQAQA RSMVTSTSPT SSLFYQLANC RSSTNNFEVM  120
PSNSRCSNYI GMQVNEMSQG VIKVNNHEER APIEELDLEL RLGHIPLPRP SASHENIFEK  180
NSNVSVLNFR *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.11e-28C2H2 family protein