PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62018732-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family LSD
Protein Properties Length: 75aa    MW: 7612.85 Da    PI: 7.8083
Description LSD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62018732-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-LSD144.33e-142953125
         zf-LSD1  1 CggCrtlLsYPrGApsVRCalCdtV 25
                    C+gCr+lL YP+GA+sV+Ca+C++V
  AUR62018732-RA 29 CSGCRNLLLYPAGATSVCCAVCNAV 53
                    ************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 75 aa     Download sequence    
MPVPLAPYPT PPVPFTPPAA NGAQSQLVCS GCRNLLLYPA GATSVCCAVC NAVTAVPPPG  60
ISKYSRTELT EVQQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32540.13e-08LSD family protein