PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62018837-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family Trihelix
Protein Properties Length: 194aa    MW: 21540.4 Da    PI: 6.9719
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62018837-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix59.67.9e-1932105170
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekk 70 
                     +Wt++e+laLi  +++++ +lrr++l+ ++We+v++ +     ++   +s+ qC++k+e+l+kry+++k++ + 
  AUR62018837-RA  32 CWTQDETLALIHSYQDKWYSLRRRNLRTADWEAVADEVnrrcPDQSPPKSSAQCRHKMEKLRKRYRAEKQRIGA 105
                     8***********************************997666677789999******************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MPSPPPASAA DPSPVPENPP PPPVVRKFPA PCWTQDETLA LIHSYQDKWY SLRRRNLRTA  60
DWEAVADEVN RRCPDQSPPK SSAQCRHKME KLRKRYRAEK QRIGALPSHN NFVVAVHAKL  120
QPTSIIEGVD EKGVYSIYED EKSLDSSQQL IMMPKDDYDC MPSGDVCSGD GPPEQCCSGA  180
CVPHPTLRVF VCA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.12e-25Trihelix family protein