PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62018984-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 121aa MW: 13498.2 Da PI: 8.0665

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62018984-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.5	3.2e-10	54	84	1	31
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC. CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkas 31 +r++h ++Er+RR+++N+ ++ +r+l+P+++ AUR62018984-RA 54 QRMTHIAVERNRRKQMNEYLAVIRSLMPPSY 84 79**************************963 PP

Sequence ? help Back to Top
Protein Sequence Length: 121 aa Download sequence
MYVTTAGYSS PEDNLCLSGE APLPSTAAET PESGGVRRKR RRRSCKNKEE VEHQRMTHIA 60 VERNRRKQMN EYLAVIRSLM PPSYVQRVEE GCQLNSVDDI AAAANHILGQ IKEEAVDRSL 120 *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	37	43	RRKRRRR
2	38	42	RKRRR
3	38	44	RKRRRRS
4	55	66	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22490.1	3e-23	bHLH family protein