PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62019123-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family M-type_MADS
Protein Properties Length: 74aa    MW: 8204.58 Da    PI: 10.1246
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62019123-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF83.61.2e-261059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    ri+n + rqvtfskRrng+lKKA+EL +LCdaev v+ifsstgkl ++s+
  AUR62019123-RA 10 RIDNVTSRQVTFSKRRNGLLKKAKELAILCDAEVGVMIFSSTGKLSDFSN 59
                    8***********************************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 74 aa     Download sequence    
MGRGKIVIRR IDNVTSRQVT FSKRRNGLLK KAKELAILCD AEVGVMIFSS TGKLSDFSNS  60
RIDLVDFVQE ICE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57230.25e-33MIKC_MADS family protein