PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62019264-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family Nin-like
Protein Properties Length: 322aa    MW: 34965.6 Da    PI: 6.9471
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62019264-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK57.42.8e-181458448
          RWP-RK  4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48
                    ++s+ed+sk Fslp+ +AA  Lgv+  vLK+iC ++G++RWPhRk
  AUR62019264-RA 14 SLSFEDVSKLFSLPLSEAADILGVSSGVLKKICNENGLERWPHRK 58
                    79******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MSSGQNQKSS IDHSLSFEDV SKLFSLPLSE AADILGVSSG VLKKICNENG LERWPHRKYL  60
AGKSIEDIKK EAAKEKNKAL RGVSPKSNVT TPSTITSTPG SLAKDNKSPK PTPEISKSQG  120
NNNAQQNQGS KTVATWRSHH MLASGLAIET STSPDEFKYG FPSAGLSECS NRWWGSSNDS  180
NDGVLKDDDT KTSSEVKDAS KVQVDGVSKD DDTKTSSEVK DASKVQVDGV SKDDDTKTSS  240
EVKDASKVQV DDSASMCEER TDSMEEDSKS DKKDEISLSA TRKRALEEGK KALNFSVLKK  300
YGADKLRNEE KILLRRLYQT S*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74480.11e-09Nin-like family protein