PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62019273-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C2H2
Protein Properties Length: 122aa    MW: 14040.9 Da    PI: 8.5687
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62019273-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.81.9e-054466123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    + C +Cgk+F  + + ++H +++
  AUR62019273-RA 44 FACRKCGKPFAVRGDWRTHEKNC 66
                    78*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    
MLRLPCYCCA PGCRNNIDHP RAKPLKDFRT LQTHYKRKHG IKPFACRKCG KPFAVRGDWR  60
THEKNCGKLW YCTCGSDFKH KRSLKDHIKS FGHGHAAYGI DCFEEEDEPA SEIEQDNESN  120
Q*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57670.11e-78C2H2 family protein