PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62019306-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NF-YA
Protein Properties Length: 304aa    MW: 32674.9 Da    PI: 6.5723
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62019306-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.86.7e-32176232158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQy++Il+RRq Rak+e e+kl +k rkpylheSRh+hAlrR+Rg+gGrF
  AUR62019306-RA 176 QEPVYVNAKQYHGILRRRQVRAKAELERKL-IKIRKPYLHESRHQHALRRARGTGGRF 232
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MPSKSILASQ PEPNSQTNTP PSAACSDQWW RGAGYGPLPL TDAVGSVPKP TLLNHPVEMS  60
GSKDDQSLSN AGDDEEETSK DSETTGSTST PRDGSCGHDL QKSQYGESGM SLGSADYYSQ  120
HPQLELVGHS IACASAPYPD LYYGGMMAAY GSQPLVPPQF FGMHQPRMPL PLEMAQEPVY  180
VNAKQYHGIL RRRQVRAKAE LERKLIKIRK PYLHESRHQH ALRRARGTGG RFAKKGEAEG  240
SSHSADEKNK SSDAGGSHSH EAHEELADMS NGSGGTRTGE GQSNQQWGNS MSNDQAPQCA  300
LAI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.11e-56NF-YA family protein