PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62019339-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family WRKY
Protein Properties Length: 243aa    MW: 27092.7 Da    PI: 5.33
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62019339-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.27.2e-28135193257
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--S CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHn 57 
                     +DgynWrKYGqK++ g++fpr+YYrCt++   gC ++k+v+rs++dp+ +++tY+ +H+
  AUR62019339-RA 135 EDGYNWRKYGQKDILGANFPRAYYRCTHRvfqGCLATKQVQRSDDDPSSFDVTYRVDHQ 193
                     8***************************9999**************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MGSNVNDMMS SKSLVNVLVE GRDLTRELQL GLGNEIHSSS NKAYGLMAKD ILAKFERSLQ  60
ILQYDSTNQF QFQLTTPATN DSPNSFSGSP KSLDSDGDFR DPAEYKDDSK KRRISPRITQ  120
RVQGSTSSGL EGPIEDGYNW RKYGQKDILG ANFPRAYYRC THRVFQGCLA TKQVQRSDDD  180
PSSFDVTYRV DHQLQGALIQ QNGVHPSSTS AANSPTIASE LSFDHHEGEF DDVFNLENPN  240
YY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.14e-40WRKY family protein