PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62019415-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family Nin-like
Protein Properties Length: 239aa    MW: 28039 Da    PI: 5.2901
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62019415-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK84.21.2e-26128177352
          RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     ++i  e+++kyF+lpi +AAkeL+v+lTvLK++CR+++IkRWPhRkiksl
  AUR62019415-RA 128 ESIGYEEIRKYFDLPISKAAKELNVGLTVLKKRCRELNIKRWPHRKIKSL 177
                     67999*******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MPQFDTEFQD YLLDYPFTNN ESLNNLEYLG DDFQLWDECP PLCEEDAWKP LSQLPPLVPS  60
LASIIENSNQ PRFNDTQFVL TASVYDNQTL DTMQKQGNKL VKNENIIVGE DSCDQNDEIR  120
KNKMTKIESI GYEEIRKYFD LPISKAAKEL NVGLTVLKKR CRELNIKRWP HRKIKSLEAL  180
INSVKEQGMV KMVERLEEDK RKLQFMAEFE LTEETKRLRQ QCFKANYKKR RALALNYV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53040.13e-37Nin-like family protein