PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62019452-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

SBP

Protein Properties

Length: 203aa MW: 22122.7 Da PI: 10.3383

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62019452-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	135	2.4e-42	77	154	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+e+C++dl+eak+yhrrhkvCe+h+kap+vlvsgl+qrfCqqCsrfhelsefDe+krsCrrrLa+hnerrrk+++ AUR62019452-RA 77 RCQAEKCTVDLTEAKRYHRRHKVCEHHAKAPSVLVSGLRQRFCQQCSRFHELSEFDETKRSCRRRLAGHNERRRKSAS 154 6**************************************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 203 aa Download sequence
MMVVVQSNPL FKIAVGREER GKVVGEIWGC RVAGGGNEEP SLVLGRSDKR WQLRGGGKGG 60 DGGDGGGSGG LLLGLARCQA EKCTVDLTEA KRYHRRHKVC EHHAKAPSVL VSGLRQRFCQ 120 QCSRFHELSE FDETKRSCRR RLAGHNERRR KSASESQGEG GSTSSQSKGS NLQLRTGDQA 180 QLSYSGNNNN NCTSSYKQFQ IR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33810.1	8e-39	SBP family protein