PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62019476-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 204aa    MW: 22605.7 Da    PI: 8.6754
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62019476-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR130.89.5e-1062155285
            FAR1   2 fYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkk.......tekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 
                     +Y++Y+k+ GF v+    +k    ++ +++ ++ ++C+++g ++ ++         +++   ++++++++C   l  ++++ g+w+v+k+++eH
  AUR62019476-RA  62 YYRSYGKQQGFGVVCVGGRKPlktEEAKTVRNYVWKCKCYGLEQYRRVVngkrvfvNVDPLVKKKSKKCNCLVVLYATMHELGEWVVIKVVNEH 155
                     8***********998766655444777788999999********9987755555555555559******************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MEDAETGVKR ALNLGHDDVN VPGGVGENVG GEVAGENNGG VKLVDGPSVG MVFSSWDEVN  60
HYYRSYGKQQ GFGVVCVGGR KPLKTEEAKT VRNYVWKCKC YGLEQYRRVV NGKRVFVNVD  120
PLVKKKSKKC NCLVVLYATM HELGEWVVIK VVNEHQEYTS KPSHSNHIVM FKNEKITKTV  180
EARIDNDYGA SSSIPQIYNN LAH*