PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62019765-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 122aa    MW: 13887 Da    PI: 9.5606
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62019765-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.33.7e-15151011396
                     TT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3  13 sgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     ++rl+ p + +  h     gg+    +   + d +grsW +++++r+++     v+t+GW +Fv+an+L++gD+++F+ d+  +++++ +v
  AUR62019765-RA  15 EHRLSWPTESL-GHlptfnGGN---RVNFEVVDDTGRSWPFRCSIRRTGPYakPVITSGWLDFVRANNLESGDTIIFYKDQVPDRQPTYRV 101
                     45677777777.4447665444...4568888***********88666544679************************7766666665554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    
MVVIFVKELK QTDIEHRLSW PTESLGHLPT FNGGNRVNFE VVDDTGRSWP FRCSIRRTGP  60
YAKPVITSGW LDFVRANNLE SGDTIIFYKD QVPDRQPTYR VRVFPKGAPV PTIFLFGYLV  120
V*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25560.12e-09RAV family protein