PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62019840-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 470aa MW: 54096.5 Da PI: 8.3072

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62019840-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.8	4.9e-20	35	126	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.....dgkwevtkleleHnHela 90 fYn+YAk+ GF vrk++s ++ +g++++r+f+C + gk+ + + +k +r++++++++Cka+++++++k ++w+vtk +++HnH + AUR62019840-RA 35 FYNKYAKQHGFVVRKDRSDTR--HGRTIRRDFYCHCGGKKPLKVVDFSKPQRNKESSKCDCKAHMRITLKKcfdifPEEWHVTKYSKQHNHVML 126 9*************98887..8889***************99****************9998877779***********876 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MLDVDLNEPL IEEENNDDEP FIGQTFESQE EAYVFYNKYA KQHGFVVRKD RSDTRHGRTI 60 RRDFYCHCGG KKPLKVVDFS KPQRNKESSK CDCKAHMRIT LKKCFDIFPE EWHVTKYSKQ 120 HNHVMLPPEA MRFLPSNRNI SGEDEKKILL LKEAGLSARQ IIRVLELEKN VGHGELPFIQ 180 KDVRNLFGRV KRLLGANDSK SLLEYMKSTN EENNKFQYAY TVDGERSCWF ATLLRENYQK 240 WCADFYNLYK MTITEEFERS WTLMIAKYNL QENKHVQGLY NVALAVQEIC QGQSHSNMVA 300 TLRPISMKTK SPLEGQAFEV FTSFAFKKFQ DELIKASQYS IIQIEGNIPS SYLPLRWHCD 360 RLQPTVENQE IISEAMILEE ESETVHNDIG VGGDDVLCPP KSKTKGRPPK KRERGGKESG 420 KKKTKCCSIC KQPGHTKPTC PNKENIFSLN DTNEGTSSAT QKKTKEDGS*

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MLDVDLNEPL IEEENNDDEP FIGQTFESQE EAYVFYNKYA KQHGFVVRKD RSDTRHGRTI  60
RRDFYCHCGG KKPLKVVDFS KPQRNKESSK CDCKAHMRIT LKKCFDIFPE EWHVTKYSKQ  120
HNHVMLPPEA MRFLPSNRNI SGEDEKKILL LKEAGLSARQ IIRVLELEKN VGHGELPFIQ  180
KDVRNLFGRV KRLLGANDSK SLLEYMKSTN EENNKFQYAY TVDGERSCWF ATLLRENYQK  240
WCADFYNLYK MTITEEFERS WTLMIAKYNL QENKHVQGLY NVALAVQEIC QGQSHSNMVA  300
TLRPISMKTK SPLEGQAFEV FTSFAFKKFQ DELIKASQYS IIQIEGNIPS SYLPLRWHCD  360
RLQPTVENQE IISEAMILEE ESETVHNDIG VGGDDVLCPP KSKTKGRPPK KRERGGKESG  420
KKKTKCCSIC KQPGHTKPTC PNKENIFSLN DTNEGTSSAT QKKTKEDGS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	2e-48	FAR1 family protein