PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62019864-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 123aa    MW: 14139.2 Da    PI: 9.8436
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62019864-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.92.7e-11799386
                    EE-..-HHHHTT-EE--HHH.HTT............---..--SEEEEEETTS.-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE CS
              B3  3 kvltpsdvlksgrlvlpkkfaeeh............ggkkeesktltledesg.rsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkl 84
                    k lt+ d+ +  rl+ p k+++                 + e+ + +++d +g + W+++++ r++s+    v+++GW +F k+ngL+ +D + F+ 
  AUR62019864-RA  7 KRLTQTDAET--RLSWPTKHMNLLrcssidlnrspnR--NDEKLEFKVYDIEGrNAWSLTCTTRRTSKFlkPVISGGWTRFIKDNGLCKNDEIAFY- 98
                    5554444444..4666777763336666677666432..33566999***777699*****999999989999********************999. PP

                    -S CS
              B3 85 dg 86
                     +
  AUR62019864-RA 99 -K 99
                    .3 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
MELIFTKRLT QTDAETRLSW PTKHMNLLRC SSIDLNRSPN RNDEKLEFKV YDIEGRNAWS  60
LTCTTRRTSK FLKPVISGGW TRFIKDNGLC KNDEIAFYKN MDPASYIDKP FFIGVISKAP  120
QG*