PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62019921-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HD-ZIP
Protein Properties Length: 183aa    MW: 20914.2 Da    PI: 5.3582
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62019921-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox47.82.5e-151391856
                    HHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox 18 lFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    +F +++ p  ++++++A++lgL  rqV++WFqNrRa+ k
  AUR62019921-RA  1 MFSSESRPGSKTKQQIADQLGLHPRQVSIWFQNRRARSK 39
                    599999*******************************99 PP
2HD-ZIP_I/II91.87.8e-302771893
     HD-ZIP_I/II 18 FeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
                    F++e++  ++ K+++a +Lgl+prqv +WFqnrRAR k+kq+E+dy+ Lk++yd+l+++ e L+ke+++L+ e+k+
  AUR62019921-RA  2 FSSESRPGSKTKQQIADQLGLHPRQVSIWFQNRRARSKSKQTERDYSILKACYDNLASKFEVLKKENQSLTIEIKR 77
                    7778888899************************************************************999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MFSSESRPGS KTKQQIADQL GLHPRQVSIW FQNRRARSKS KQTERDYSIL KACYDNLASK  60
FEVLKKENQS LTIEIKRLRN LKEGPKDCTS DLAPVTCSSN GESISLSSPE KHKAQPEDYI  120
QDSILSKDKS EGFMSFEQET DSQFNMIESA DDSLASFRNH DGLESAYLME HNCISDWWDF  180
WT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13442RRARSKSKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61890.13e-38HD-ZIP family protein