PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62019926-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 425aa MW: 48700.2 Da PI: 5.1933

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62019926-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	51.8	2.6e-16	62	150	2	88
FAR1 2 fYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 Yn+YA + GF +rk++ +++ +++++ +r +vCs g+++e+k+ ++++ ++ + rtgCka+++ +k +g ++v + HnH+ AUR62019926-RA 62 LYNSYAFKHGFGIRKDRLNRRdDKDRTPRQRFLVCSFAGFKHEKKHGEQSKVYQKRNFRTGCKAHIQFDIDKvSGLYVVVNHTMVHNHS 150 7*************99888456666677778**********999999**************99*************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
MVYQSEFRHD SNARFVDDAN DYDINDEGEV EGIVNLNEGF TEATESELFD RKVKSDEEAY 60 DLYNSYAFKH GFGIRKDRLN RRDDKDRTPR QRFLVCSFAG FKHEKKHGEQ SKVYQKRNFR 120 TGCKAHIQFD IDKVSGLYVV VNHTMVHNHS RVVVSKRHLI RSHRKVTNEQ VVMMSSLTES 180 SIPVADAVRV LKHQAGGEAN LSFLCRDAYG ALSQHKKMMF DGCDAKRLLS YFKERKSSEY 240 DFFYDFDVDE KGHLQSFFFR DNRMKVDYDA FGDLLVHDTT YRTNKYGIIC GPFVDRAQND 300 LSARAVIEEA IEECTARINL LMGEDKDVPP ELSKTNEQDV TPEKGDGSLL EPAVIFEELA 360 EEHGGLEKEH GGFEREYGGI VKEHTVQDFL PVPDGNVLAH SNEFGGSLEF FEPDDYFGVN 420 IREL*

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

MVYQSEFRHD SNARFVDDAN DYDINDEGEV EGIVNLNEGF TEATESELFD RKVKSDEEAY  60
DLYNSYAFKH GFGIRKDRLN RRDDKDRTPR QRFLVCSFAG FKHEKKHGEQ SKVYQKRNFR  120
TGCKAHIQFD IDKVSGLYVV VNHTMVHNHS RVVVSKRHLI RSHRKVTNEQ VVMMSSLTES  180
SIPVADAVRV LKHQAGGEAN LSFLCRDAYG ALSQHKKMMF DGCDAKRLLS YFKERKSSEY  240
DFFYDFDVDE KGHLQSFFFR DNRMKVDYDA FGDLLVHDTT YRTNKYGIIC GPFVDRAQND  300
LSARAVIEEA IEECTARINL LMGEDKDVPP ELSKTNEQDV TPEKGDGSLL EPAVIFEELA  360
EEHGGLEKEH GGFEREYGGI VKEHTVQDFL PVPDGNVLAH SNEFGGSLEF FEPDDYFGVN  420
IREL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-18	FAR1 family protein