PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62019948-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 328aa    MW: 35892 Da    PI: 7.9315
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62019948-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3102.72.1e-3242146199
                     EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.se 89 
                     f+kv tpsdv+k++rlv+pk++ae++    ++++e++  l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++  g+  +
  AUR62019948-RA  42 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldSSNNEKGLLLNFEDRTGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDVVSFQRGvGEiGK 136
                     89****************************77788999*************************************************66699999 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                      +l++ ++r+
  AUR62019948-RA 137 DKLFIDWRRR 146
                     9999999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MSSSSTNNNL ASTGAASTTK IEVVDEEEGN KSVVVIEREH MFDKVVTPSD VGKLNRLVIP  60
KQHAEKYFPL DSSNNEKGLL LNFEDRTGKP WRFRYSYWNS SQSYVMTKGW SRFVKEKKLD  120
AGDVVSFQRG VGEIGKDKLF IDWRRRPDAS TLLPHHHQGN NTSITSGGVG GYGFGFGNAV  180
NPPQYPVTGS LIFLRSSSSI TPTFGASSST TSSIPQNIED HHQHQFEQGG GGGSLMQVQR  240
EEGGVEPMVY ESVPVVQGKA AAKRLRLFGV NMDCPISHQT HDFDIFQQQH HHLLPLQLRS  300
FYGGAGASPV KGKSSTSSSS MSLDLDI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.14e-76B3 family protein