PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62020169-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 741aa MW: 83310.5 Da PI: 7.1208

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62020169-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	52	2.4e-16	63	135	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY++YA+++GFs+++ ++ + + + +t+r+fvC+keg +++ +C+a+lk++++ +kw vtk+++eHnH+l AUR62020169-RA 63 FYDDYARRTGFSTKICQTGRFRPDSAVTSRQFVCTKEGLKRRP---------------SECEAMLKIELK-GNKWAVTKFVKEHNHALE 135 9***********************************98774...............36******.9*************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 741 aa Download sequence
MGVDIIDVEG GNMRIRASTD NGDAEAMGVE VSPTGVYVAQ DEVHVLEPHV GMEFESESAA 60 KTFYDDYARR TGFSTKICQT GRFRPDSAVT SRQFVCTKEG LKRRPSECEA MLKIELKGNK 120 WAVTKFVKEH NHALESPSKL HSIRPHKHFA GAVKNVAEVY QAGVMVPSGV MYVTMDGNHV 180 SQTSVEANRL ARSISPLESS RLAAVSQVLP KSRHRINKSH ILREGQEKLA HVCHMHPNFQ 240 AELYNCVNLT ETIEEFESSW DFIIDKYDLR RNDWLQSLYN ARRQWVPVYF RDTFFAAVSP 300 NQGVECSFFD GYVNQHTTLP MFFRQYERAM EYWFEKEIEA DFDTISNTPV LSTPSPMEKQ 360 AADLYTRKIF TKFQDELVET FVYTANRIDG DGDTSTYRVA KFEDDHKAYT VTLNISDMRA 420 SCSCLMFEYS GILCRHILTV FTVTNVLTLP PHYILRRWTR NAKSVVSLDE PGANYAQEST 480 PSRYNSLCRE AVKYAEEGAT ASDTYTAALT GLKEGAKKIA AVKKIVAKVV PQTPKKSTSG 540 YVDKNISAAD SPLLWPRQDE VTRQFNLNDS ATLPHYVSGM NLLRVAPTSV QRDDGPTDNM 600 VVLPCLKSMT WVMESKNSTP ANRVAVINLK LQDYSKSPAV ESEVKFQLST VTLEPMLKSM 660 AQISEQLSTP ANRVAVINLK ACFSNLALQD TETISGESEV KFQVSRDTLG AMLRSMAYIR 720 EQLSVLVEAQ IEQPSKKQRK *

Sequence ? help Back to Top

Protein Sequence Length: 741 aa Download sequence

MGVDIIDVEG GNMRIRASTD NGDAEAMGVE VSPTGVYVAQ DEVHVLEPHV GMEFESESAA  60
KTFYDDYARR TGFSTKICQT GRFRPDSAVT SRQFVCTKEG LKRRPSECEA MLKIELKGNK  120
WAVTKFVKEH NHALESPSKL HSIRPHKHFA GAVKNVAEVY QAGVMVPSGV MYVTMDGNHV  180
SQTSVEANRL ARSISPLESS RLAAVSQVLP KSRHRINKSH ILREGQEKLA HVCHMHPNFQ  240
AELYNCVNLT ETIEEFESSW DFIIDKYDLR RNDWLQSLYN ARRQWVPVYF RDTFFAAVSP  300
NQGVECSFFD GYVNQHTTLP MFFRQYERAM EYWFEKEIEA DFDTISNTPV LSTPSPMEKQ  360
AADLYTRKIF TKFQDELVET FVYTANRIDG DGDTSTYRVA KFEDDHKAYT VTLNISDMRA  420
SCSCLMFEYS GILCRHILTV FTVTNVLTLP PHYILRRWTR NAKSVVSLDE PGANYAQEST  480
PSRYNSLCRE AVKYAEEGAT ASDTYTAALT GLKEGAKKIA AVKKIVAKVV PQTPKKSTSG  540
YVDKNISAAD SPLLWPRQDE VTRQFNLNDS ATLPHYVSGM NLLRVAPTSV QRDDGPTDNM  600
VVLPCLKSMT WVMESKNSTP ANRVAVINLK LQDYSKSPAV ESEVKFQLST VTLEPMLKSM  660
AQISEQLSTP ANRVAVINLK ACFSNLALQD TETISGESEV KFQVSRDTLG AMLRSMAYIR  720
EQLSVLVEAQ IEQPSKKQRK *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein