PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62020210-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family YABBY
Protein Properties Length: 191aa    MW: 21207.7 Da    PI: 7.8251
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62020210-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY232.31.1e-7131643170
           YABBY   3 vfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvs 97 
                       +s+e+vCyv+C+fCntilavsvP  s++++vtvrCGhC++llsvn+  +   ++ +++++   ++      + ++ + +s  + +  +s+s+ 
  AUR62020210-RA   3 FSTSAERVCYVHCTFCNTILAVSVPCCSMYNMVTVRCGHCANLLSVNIGLSPPSMPYQDNFQLLRQH-----YNYQDVSRDSSSTITGGSSSSTI 92 
                     56789******************************************************95543333.....22333333333333333333333 PP

           YABBY  98 seklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                     ++  s+++d + +r+pp irPPekrqrvPsayn+fikeeiqrikasnP+ishreafsaaaknWahfP+ihfgl
  AUR62020210-RA  93 TTIASDDHDVQQTRPPP-IRPPEKRQRVPSAYNKFIKEEIQRIKASNPEISHREAFSAAAKNWAHFPHIHFGL 164
                     33447778888888677.9****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MEFSTSAERV CYVHCTFCNT ILAVSVPCCS MYNMVTVRCG HCANLLSVNI GLSPPSMPYQ  60
DNFQLLRQHY NYQDVSRDSS STITGGSSSS TITTIASDDH DVQQTRPPPI RPPEKRQRVP  120
SAYNKFIKEE IQRIKASNPE ISHREAFSAA AKNWAHFPHI HFGLNLDGQS QARLDQPVSG  180
EGTNKSHGFY *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.11e-72YABBY family protein