PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62020261-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 259aa    MW: 29053.5 Da    PI: 8.5663
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62020261-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM137.68e-4341311127
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                     lppGfrF Pt+eel+ +yL+++ +    +l++vi+++diy++eP++Lp      ++ ++++w+fF+++++++a+g r+nr+t+sgyWkatg+   
  AUR62020261-RA   4 LPPGFRFYPTEEELIAFYLHNSQR---PDLHRVIPSIDIYNFEPSQLPGlageLCHRDTEQWFFFTPQQEREARGGRPNRTTASGYWKATGSPSY 95 
                     79*****************98654...455678***************545653444677*********************************** PP

             NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                     v+s++++++g+kktLvfykg+ap g+kt+W m+ey+
  AUR62020261-RA  96 VYSSQNKVIGVKKTLVFYKGKAPIGRKTKWKMNEYK 131
                     ***********************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MEQLPPGFRF YPTEEELIAF YLHNSQRPDL HRVIPSIDIY NFEPSQLPGL AGELCHRDTE  60
QWFFFTPQQE REARGGRPNR TTASGYWKAT GSPSYVYSSQ NKVIGVKKTL VFYKGKAPIG  120
RKTKWKMNEY KAIKQQDFQT INASSITTSI PELKHGLSLC RVYITSGCAR AFDRRPPGTI  180
LSDLNPQNYQ AIQASGKGSQ SADATPLLME KSSSTDSFNS RCDDQGTVRE AGAGSSYNSE  240
FELAEDGFFS DWKQLGRF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.12e-80NAC family protein