PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62020288-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family WRKY
Protein Properties Length: 254aa    MW: 27762.1 Da    PI: 10.196
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62020288-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.97.9e-32161219259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D y+WrKYGqK++kgs++pr+YY+C++  gCp++k+ver+++dp+++++tYegeH+h+
  AUR62020288-RA 161 SDDYSWRKYGQKPIKGSPYPRGYYKCSTVrGCPARKHVERATDDPTMLIVTYEGEHRHS 219
                     69************************9888****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
PPVCQLQQQQ PEKPIPLRAI RHHPVTLDFS KPNPNPNPKQ CGSVSKSASF SISSSANSSS  60
FLSSITGEET VSNGKQFGSG ARSMFVPPSS SGKPPLSTSS SSHHNKSCNH HRHQHNEFSD  120
DISGKACGST RCHCSSKRKK LRVKKTMRVP AISAKTADIP SDDYSWRKYG QKPIKGSPYP  180
RGYYKCSTVR GCPARKHVER ATDDPTMLIV TYEGEHRHSP APATQDHNLQ VVPTTAAPAW  240
FQPHHHPILT LSD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.21e-53WRKY family protein