PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62020296-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 227aa    MW: 26564.8 Da    PI: 10.17
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62020296-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3438e-141771798
                    E--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3 17 vlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                    ++p +f+++     +g++   k ++l++ s r W+vk+  ++++   ++++GW+eF+  n+L  gDf+vF ++  s+  + v vf+
  AUR62020296-RA  1 SIPVSFLRHLeeelQGEP--LKSVVLMTDSQRHWDVKI--EGGR---YFKDGWQEFCLYNQLGMGDFLVFIHQ--SQLLFQVEVFD 77
                    6999**966699665554..457***************..6665...79**********************64..55555787776 PP
2B3604e-19133214486
                     E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
              B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                     v+++s+ +k + ++lp +f +++g + +++  +tl d +g sW+v+l+++++++++++++GW+ F  an+L+ gD++ F+l +
  AUR62020296-RA 133 VTLTSYCFKMKFIYLPMRFSRTNGFE-NRNYNMTLVDVDGMSWKVRLSFNRNRRQCYIRRGWSYFQVANNLNPGDILSFQLLK 214
                     5679*******************766.57789************************************************865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
SIPVSFLRHL EEELQGEPLK SVVLMTDSQR HWDVKIEGGR YFKDGWQEFC LYNQLGMGDF  60
LVFIHQSQLL FQVEVFDPTT ACQRLYSPTF HRHHNCKGLE KRKVLKNKST SKRKPLDFVV  120
GLAAAGETSR CHVTLTSYCF KMKFIYLPMR FSRTNGFENR NYNMTLVDVD GMSWKVRLSF  180
NRNRRQCYIR RGWSYFQVAN NLNPGDILSF QLLKIGKRPI LKCYGK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.15e-27B3 family protein