PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62020352-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 247aa    MW: 26526.5 Da    PI: 7.5721
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62020352-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.15.8e-203584255
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a+++a+++l+g
  AUR62020352-RA 35 KFRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDKAARQLRG 84
                    89*******.**********883....5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MRRGRSTAKT TPTQNGSTPL DPTPPAMGIN GSNVKFRGVR KRPWGRFAAE IRDPWKKTRV  60
WLGTFDSAED AARAYDKAAR QLRGPKAKTN FPPSSSNHHH QNDAVLNHPS PFYRNDAVLV  120
DPYHHGTDGG GGCSDAEMIQ RPASSGMSST VESYSASQAI RIRHAPPVKA RVVHAPAAED  180
CRSDCDSSSS VIDDVDGDIA SSSAAVGFNS EVVLKQPLPF DLNLPPPEID GCFLGFEDFP  240
TTALCL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20310.11e-26ERF family protein