PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62020426-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB
Protein Properties Length: 124aa    MW: 13264.1 Da    PI: 10.1148
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62020426-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.68.9e-163784148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++ Ed  l d+vk+ G g+W+++ r  g+ R++k+c++rw ++l
   AUR62020426-RA 37 KGPWSATEDTVLMDYVKKNGEGNWNAVQRNTGLQRCGKSCRLRWANHL 84
                     79******************************************9996 PP
2Myb_DNA-binding26.61.4e-0890119131
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartm 31 
                      +g+++++E+ l++d++ +lG++ W++I++++
   AUR62020426-RA  90 KGAFSADEERLIIDLHSKLGNK-WARISAHI 119
                      799*******************.*****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    
MILMSNNISG VGLEVVSGGT NGSSGDGVGD GGIILKKGPW SATEDTVLMD YVKKNGEGNW  60
NAVQRNTGLQ RCGKSCRLRW ANHLRPNLKK GAFSADEERL IIDLHSKLGN KWARISAHIF  120
LGT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55020.12e-48MYB family protein