PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62020476-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 637aa MW: 72430.3 Da PI: 7.1857

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62020476-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	84	2.4e-26	78	165	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 kfY+eYAk++GF++++++s++sk+++ +++++f Cs++g + e++ ++r+ ++++t+Cka+++vk++k gkw+++++ +eHnHel p AUR62020476-RA 78 KFYQEYAKSMGFTTSIKNSRRSKKSKDFIDAKFACSRYGVTPESDVG---SSRRCSVKKTDCKASMHVKRNKYGKWVIHEFIKEHNHELLP 165 6**************************************999877...889999******************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 637 aa Download sequence
MDILTKDSHP GVASIVDQRR DICHGEGASG NMVDIVNVVH DQDGGAGTSA TSSLLLEGDI 60 DIGPDSDLQF ESHEAAYKFY QEYAKSMGFT TSIKNSRRSK KSKDFIDAKF ACSRYGVTPE 120 SDVGSSRRCS VKKTDCKASM HVKRNKYGKW VIHEFIKEHN HELLPALAYY FRIHRNVKLI 180 EKNNIDILHA VSERTKKMFV DMSRQSASFM NHGSLRDAHS SLLDKEKLAH VAKRHENFTG 240 KFNECVFKSW TDEQFDLRWW KMVGRFDLQD DEWIRSLYED RKKWAPLYLS DSFLAGMSPP 300 HRTDSNRYEE EAIADFDTWH KQPALKSPSP WEKQMSTIYT HAIFKKFQVE VLGVVGCHPR 360 KEGEDGTSIT YRVDDCEKDE TFFVAWDETK SQVSCLCRSF EYRGFLCRHA MLVLQICGIS 420 SIPSQYILRR WTKDAKTTQL MVEGIERLQT RAQRYVALCK QAIELSEEGS LTQESHNITL 480 RTLVDTLKNC VSVNNMNRSA IEVGDTYRDH DIVEAYQGNI STRTSKKKNA VKKRKVASET 540 EVMLTDAEDN LHQMENLTSD GISLNNYYGS QQNVPGVGLG QLNSIGPNHE GFFGAQQSVH 600 GLGHLDFRSS SSFSYSLQDD HDLRSAQLRG DASRHT*

Sequence ? help Back to Top

Protein Sequence Length: 637 aa Download sequence

MDILTKDSHP GVASIVDQRR DICHGEGASG NMVDIVNVVH DQDGGAGTSA TSSLLLEGDI  60
DIGPDSDLQF ESHEAAYKFY QEYAKSMGFT TSIKNSRRSK KSKDFIDAKF ACSRYGVTPE  120
SDVGSSRRCS VKKTDCKASM HVKRNKYGKW VIHEFIKEHN HELLPALAYY FRIHRNVKLI  180
EKNNIDILHA VSERTKKMFV DMSRQSASFM NHGSLRDAHS SLLDKEKLAH VAKRHENFTG  240
KFNECVFKSW TDEQFDLRWW KMVGRFDLQD DEWIRSLYED RKKWAPLYLS DSFLAGMSPP  300
HRTDSNRYEE EAIADFDTWH KQPALKSPSP WEKQMSTIYT HAIFKKFQVE VLGVVGCHPR  360
KEGEDGTSIT YRVDDCEKDE TFFVAWDETK SQVSCLCRSF EYRGFLCRHA MLVLQICGIS  420
SIPSQYILRR WTKDAKTTQL MVEGIERLQT RAQRYVALCK QAIELSEEGS LTQESHNITL  480
RTLVDTLKNC VSVNNMNRSA IEVGDTYRDH DIVEAYQGNI STRTSKKKNA VKKRKVASET  540
EVMLTDAEDN LHQMENLTSD GISLNNYYGS QQNVPGVGLG QLNSIGPNHE GFFGAQQSVH  600
GLGHLDFRSS SSFSYSLQDD HDLRSAQLRG DASRHT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-152	FAR1 family protein