PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62020518-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 212aa    MW: 24038.6 Da    PI: 6.0337
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62020518-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B336.67.8e-121291903998
                     EETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-..SSSEE..EEEEE- CS
              B3  39 edesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkld..grsefelvvkvfr 98 
                      ++  +sWe ++ + +++ +  + l + WkeF+ +n+Lk+gD+++F+l+  +++  +l+v+v+r
  AUR62020518-RA 129 LTRGKKSWETTY-FGRHPTHkrFEL-SSWKEFAVDNKLKVGDVCIFELMtlSDEALKLKVQVLR 190
                     33567*******.544444421555.5********************87645588899999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MKPRVNTCED IDIEPKTGAP FFHIILTKTH VCPRYLLQYQ TIPAEGARIL PDIEVPVILT  60
HGTKSWRMNY IGKNVVHKRD MNEEQQLDPV SIDTEEDEEI EPLSGNPMFH TIPAEITHIL  120
PHKTAPVTLT RGKKSWETTY FGRHPTHKRF ELSSWKEFAV DNKLKVGDVC IFELMTLSDE  180
ALKLKVQVLR GDFPSILLGN DGTSDNPIVV E*