PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62020638-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bZIP

Protein Properties

Length: 257aa MW: 27777.5 Da PI: 4.9627

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62020638-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	53.4	5.5e-17	87	142	3	58
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 ++kr+rr+ +NRe+ArrsR+RK+a ++eLe v++L eN++L k+l+e ++ + AUR62020638-RA 87 DVKRQRRMVSNRESARRSRRRKQAHQQELEVQVEQLGLENTTLFKQLNEAAQQLRE 142 57******************************************777776666554 PP

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence
MKQDIINSFA TGGGFDQQTI SWYQNFTPQQ PCLSATIDSQ SSICAGSPTS ILIKPKTGDN 60 QGSGSSEDDE EETEAGQCEQ SGDDGVDVKR QRRMVSNRES ARRSRRRKQA HQQELEVQVE 120 QLGLENTTLF KQLNEAAQQL REATTNNRVL KSDVEALRAK VKLAEDRVTR GTLNQLLQST 180 NLGSPSPQMA GSTQNISCVT NVTPAIMVQG QDSSFEGAFS WQNSNDHVLH GSASSGLMSD 240 STVSCGGTSC VTGIWR*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	102	109	RRSRRRKQ
2	104	109	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24800.1	3e-27	bZIP family protein