PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62020929-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

G2-like

Protein Properties

Length: 225aa MW: 24663.6 Da PI: 9.9309

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62020929-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.1	1.9e-33	33	87	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt +LHerFv+av+qLGG++kAtPk+i+++m+vkgLtl h+kSHLQkYRl AUR62020929-RA 33 KPRLRWTADLHERFVDAVTQLGGPNKATPKAIMRTMGVKGLTLFHLKSHLQKYRL 87 79****************************************************8 PP
2	Myb_DNA-binding	71.1	1.7e-22	35	86	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++e++vdav+qlGg+ t+k+I+rtmg kg+tl ++ks++qky+ AUR62020929-RA 35 RLRWTADLHERFVDAVTQLGGPnkaTPKAIMRTMGvKGLTLFHLKSHLQKYR 86 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MAGPTDEIHQ VGPTSTSAAA TGDPRLVLTS DPKPRLRWTA DLHERFVDAV TQLGGPNKAT 60 PKAIMRTMGV KGLTLFHLKS HLQKYRLGKQ SGKDMIEAPK DGACYTKMSI YIIKDGIIFK 120 SYALYTSNIA NIHGELGLKR GYKVKEALRT QMEVQTKLHL QVEAEKHLQI RQDAERRYMA 180 MLEKACKILA DQLMGVAIAE NHAQTLQGQL PEVGITIVSG GQSA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24120.1	2e-61	G2-like family protein