PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62021197-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB

Protein Properties

Length: 222aa MW: 25450.5 Da PI: 6.7751

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62021197-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.2	4.4e-14	6	54	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmgkgRtlkqcksrwqkyl 48 W++eEd++l+d ++ g+ +W++ ++ g+ R++k+c++rw +yl AUR62021197-RA 6 RCWSPEEDQRLIDFIRNNNGRpcDWDSLPKLAGLDRCGKSCRLRWVNYL 54 57*********************************************97 PP
2	Myb_DNA-binding	46	1.2e-14	60	104	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +++ E ++l++++ +lG++ W++Ia++++ gRt++++k+ w+++ AUR62021197-RA 60 REPFSDHENKILKQLHGLLGNR-WAAIAAKLP-GRTDNDVKNQWNTH 104 789*****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MFNNKRCWSP EEDQRLIDFI RNNNGRPCDW DSLPKLAGLD RCGKSCRLRW VNYLNPEIKR 60 EPFSDHENKI LKQLHGLLGN RWAAIAAKLP GRTDNDVKNQ WNTHFKNHTT TNMFPTTTHI 120 TRHMAQWESI RVETEARLTY ESLCFPLGYP TYNSDTFLSL WNSEVGESFR KIETCSGMTG 180 QVWQPVSVKK EQQGTYSGSD DLGDSSSDIA MNMLLDSPVS E*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61250.1	4e-58	MYB family protein