PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62021240-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

G2-like

Protein Properties

Length: 355aa MW: 39457.7 Da PI: 4.7629

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62021240-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	82.2	5.6e-26	3	56	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kp+l+Wt+ LH+rF+eav++L G +kA+Pk+ile m+v+gL +e+++SHLQkYR+ AUR62021240-RA 3 KPKLVWTTSLHSRFLEAVNNL-GVDKAVPKRILEYMNVPGLKRENIASHLQKYRI 56 79*****************.******************************6 PP
2	Myb_DNA-binding	36.4	1.2e-11	5	55	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 ++ WTt ++ ++++av+ lG + +k+I ++m+ g+ ++++ s++qky+ AUR62021240-RA 5 KLVWTTSLHSRFLEAVNNLGVDkaVPKRILEYMNvPGLKRENIASHLQKYR 55 679***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MKKPKLVWTT SLHSRFLEAV NNLGVDKAVP KRILEYMNVP GLKRENIASH LQKYRIFLKR 60 VSDITTDNEN GIPNNWNERP FRSSFVLNEI TFLTGSIQDQ YRGLVAERSL GMTNDPNFEI 120 GESSTQGANG PRKQARCGAP SDLSEAVRSL KQKIELLEKL QKLQRMHKQV SPSPIDGRVL 180 SNQQFHPANC NNNNNYVGLR ISTDGELISP TNNTPIVLGD NNVANANFAN GMHGSNNFTE 240 NANNNAQEVN YYGMNFADNS FHNNTNTPLA DLFSSDVDDW NFNTPNVDQI ATPQANPFGM 300 SQEMPNMQGG IGDEFMELGI DIPMDQDYFD NNFGFGPFDA QGNAQGGFAE GLDQA

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MKKPKLVWTT SLHSRFLEAV NNLGVDKAVP KRILEYMNVP GLKRENIASH LQKYRIFLKR  60
VSDITTDNEN GIPNNWNERP FRSSFVLNEI TFLTGSIQDQ YRGLVAERSL GMTNDPNFEI  120
GESSTQGANG PRKQARCGAP SDLSEAVRSL KQKIELLEKL QKLQRMHKQV SPSPIDGRVL  180
SNQQFHPANC NNNNNYVGLR ISTDGELISP TNNTPIVLGD NNVANANFAN GMHGSNNFTE  240
NANNNAQEVN YYGMNFADNS FHNNTNTPLA DLFSSDVDDW NFNTPNVDQI ATPQANPFGM  300
SQEMPNMQGG IGDEFMELGI DIPMDQDYFD NNFGFGPFDA QGNAQGGFAE GLDQA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-25	ARR-B family protein