PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62021242-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 237aa    MW: 26326.3 Da    PI: 4.4346
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62021242-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.14.3e-184898155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + y+G+r++  +g+Wv+e+r+p   +k++r++lg+f tae+Aa+a++ a+ +l+g
  AUR62021242-RA 48 PVYRGIRQRN-NGKWVCEVREP---NKKTRIWLGTFPTAEMAARAHDVAAMALRG 98
                    68*****999.8******9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MNMSYTNQGS SSDSSMSPNS TEEEGLMLAS AYPKKQAGRK KFTETRHPVY RGIRQRNNGK  60
WVCEVREPNK KTRIWLGTFP TAEMAARAHD VAAMALRGRS GACLNFADSV WRLPVPASSD  120
TKDIQRAAAE AAEAFRPQLP PVEELQQAVD EKAEEEAQSS TTATMDEMNN MSFSNNENGM  180
YMDYEMELET PGLIADMYHG MGMLPPPNMT SFNETTYEDD DMANGTADLP LWSYSF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.16e-50ERF family protein