PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62021280-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 151aa    MW: 16631.1 Da    PI: 4.4076
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62021280-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.38.8e-0644673255
                    ..TTS-STCHHHHHHHHHHHHHHH CS
             HLH 32 kapskKlsKaeiLekAveYIksLq 55
                    +++++K s ++ L++Av+YIk+L+
  AUR62021280-RA 44 NTTNGKRSTSDHLTEAVNYIKDLE 67
                    5789*****************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MFPFQRSGEL SFQTTEFVAE EEQIDAENQI YWLDGAPVNI GDMNTTNGKR STSDHLTEAV  60
NYIKDLEKNI QELSDKRDQL KAAPESHTST YQVGSSSHPR ASLGSVEISP CLGGLDIDIN  120
AGYEDQSDRR NMHRFPAASS EIGQSSFLSK *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12540.11e-13bHLH family protein