PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62021282-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 199aa    MW: 22595.8 Da    PI: 9.0354
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62021282-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.11.4e-1263115155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     +++ h e+Er+RR+++ + ++ Lr+llP       ++K s +e  ++A++YIk+L+
  AUR62021282-RA  63 KKVIHREVERQRRQEMSNLYSSLRSLLPVeY---VKGKRSVSEHITEATRYIKDLE 115
                     5778*************************77...9******************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MFPFQSVAAG TTTTNIDPVH QPHYGVDSKL KSPKTRKLRS GKSVQDNKIN NEDEIKGNDI  60
TNKKVIHREV ERQRRQEMSN LYSSLRSLLP VEYVKGKRSV SEHITEATRY IKDLEKNIEI  120
TAGVEEDDPC PISKTLKVLA QEGLDVVSCV SNKVNQRWIY VIYCEHAYST VYLRATEEGW  180
SGIEPKPLER LKVLLVPK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.16e-22bHLH family protein