PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62021352-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 166aa    MW: 17943.8 Da    PI: 4.1589
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62021352-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.51.5e-081446132
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmg 32
                     +g+W++eEd  lv+ v+++G+g +W + ++++ 
   AUR62021352-RA 14 KGPWSAEEDTMLVNFVAKYGNGgNWISLPKKID 46
                     79*********************9988888775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MGRSPCCDKA KVKKGPWSAE EDTMLVNFVA KYGNGGNWIS LPKKIDFSTL NHQTLGNESI  60
MSSRLGQGGI FDVGEGKENV TLSYDTSSGS RTPEISSYSG SSSSYVEFDQ KSSGSISING  120
EEDEFWMDLL SESFDDVVVG SKLEEKISEI ASLLDDSFCN NGFLM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57620.17e-20MYB family protein